If the setup wizard came up, the router was reset (to what degree, we don't know). Best to use the method recommended (you may have used the same method, unknowingly).
Performing a full reset via the GUI is suggested for especially stubborn issues (and the router is only superficially reset). If your router/network is working as expected right now, I wouldn't worry about it. But keep it in mind (as something to do in the future), if the router/network stability degrades in the next few days/weeks.
AiProtection and/or QoS are available to use as needed and required. QoS also depends on your ISP speeds too (both up and down).
Keep in mind that toggling features on/off isn't the same as leaving them at their defaults after a full reset (some settings do not toggle 'back', and another full reset may be needed).