The router has 3 heat sinks inside, one on top of the CPU, one on on top of the Radio circuits and one at the back cooling Amplifiers through the PCB. CPU and Radio circuits are covered with metal caps, a bit hard to remove. The heat from ICs is transferred to the metal caps first, then from the metal caps to the heat sinks. There are about 10 thermal transfer pads inside, all covering different gaps between ICs, metal caps and the heat sinks. In other words, in order to replace all the heat transfer pads with something better, you'll need to find the right thickness copper shims for all the heat transfer places. Still want to try?
Laptop cooling pad is a much simpler, faster and effective solution for RT-AC(X)88U routers without voiding the warranty on the device. You just need to blow the dust out from time to time with compressed air can. On my RT-AC86U I have installed 2 x 70mm 12V ball-bearing fans running on 5V off router's own USB 2.0 port. CPU temperature never goes higher than 55C, compared to reaching 96C without active cooling. There is no noticeable noise whatsoever.